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Research School of Biology
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Publications 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001
Barnett, R., Shapiro, B., Barnes, I., Ho, S.Y.W., Burger, J., Yamaguchi, N., Higham, T.F.G., Wheeler, H.T., Rosendahl, W., Sher, A.V., Sotnikova, M., Kuznetsova, T., Baryshnikov, G.F., Martin, L.D., Harington, C.R., Burns, J.A., Cooper, A. 2009. Phylogeography of lions (Panthera leo ssp.) reveals three distinct taxa and a late Pleistocene reduction in genetic diversity. Molecular Ecology 18: 1668-1677. Braby, M.F. 2009. The life history and biology of Euploea alcathoe enastri Fenner (Lepidoptera: Nymphalidae) from northeastern Arnhem Land, Northern Territory, Australia. Australian Entomologist 36(2): 51-62. Bromham, L. 2009. Putting the 'bio' into bioinformatics. Biology Letters 5: 391-393. Bromham, L. 2009. Why do species vary in their rate of molecular evolution? Biology Letters 5: 401-404. Calcott, B. 2009. Lineage Explanations: Explaining How Biological Mechanisms Change. Brit. J. Phil. Sci. 60: 51-78. Christenson, J.K., Gordon, D.M. 2009. Evolution of colicin BM plasmids: the loss of the colicin B activity gene. Microbiology 155: 1645-1655. Cockburn, A., Dalziell, A.H., Blackmore, C.J., Double, M.C., Kokko, H., Osmond, H.L., Beck, N.R., Head, M.L., Wells, K. 2009. Superb fairy-wren males aggregate into hidden leks to solicit extragroup fertilizations before dawn. Behavioral Ecology 20: 501-510. Cooney, S.J.N., Olsen, P.D., Garnett, S.T. 2009. Ecology of the coprophagous moth Trisyntopa neossophila Edwards (Lepidoptera: Oecophoridae). Australian Journal of Entomology 48: 97-101. Crisp, M.D., Arroyo, M.T.K., Cook, L.G., Gandolfo, M.A., Jordan, G.J., McGlone, M.S., Weston, P.H., Westoby, M., Wilf, P., Linder, H.P. 2009. Phylogenetic biome conservatism on a global scale. Nature 458: 754-756. Crisp, M.D., Cook, L.G. 2009. Explosive radiation or cryptic mass extinction? Interpreting signatures in molecular phylogenies. Evolution 63(9): 2257-2265. Cunningham, R., Olsen, P. 2009. A statistical methodology for tracking long-term change in reporting rates of birds from volunteer-collected presence-absence data. Biodiversity and Conservation 18: 1305-1327. DeGabriel, J.L., Moore, B.D., Foley, W.J., Johnson, C.N. 2009. The effects of plant defensive chemistry on nutrient availability predict reproductive success in a mammal. Ecology 90(3): 711-719. Detto, T., Backwell, P.R.Y. 2009. The fiddler crab Uca mjoebergi uses ultraviolet cues in mate choice but not aggressive interactions. Animal Behaviour 78: 407-411. Detto, T., Backwell, P.R.Y. 2009. Social monogamy in a fiddler crab, Uca capricornis. Journal of Crustacean Biology 29(3): 283-289. Doody, J.S., Green, B., Rhind, D., Castellano, C.M., Sims, R., Robinson, T. 2009. Population-level declines in Australian predators caused by an invasive species. Animal Conservation 12: 46-53. Ebert, D., Hayes, C., Peakall, R. 2009. Chloroplast simple sequence repeat markers for evolutionary studies in the sexually deceptive orchid genus Chiloglottis. Molecular Ecology Resources 9: 784-789. Ebert, D., Peakall, R. 2009. Chloroplast simple sequence repeats (cpSSRs): technical resources and recommendations for expanding cpSSR discovery and applications to a wide array of plant species. Molecular Ecology Resources 9: 673-690. Ebert, D., Peakall, R. 2009. A new set of universal de novo sequencing primers for extensive coverage of noncoding chloroplast DNA: new opportunities for phylogenetic studies and cpSSR discovery. Molecular Ecology Resources 9: 777-783. Endicott, P., Ho, S.Y.W., Metspalu, M., Stringer, C. 2009. Evaluating the mitochondrial timescale of human evolution. Trends in Ecology and Evolution 24(9): 515-521. Felton, A.M., Felton, A., Lindenmayer, D.B., Foley, W.J. 2009. Nutritional goals of wild primates. Functional Ecology 23: 70-78. Felton, A.M., Felton, A., Raubenheimer, D., Simpson, S.J., Foley, W.J., Wood, J.T., Wallis, I.R., Lindenmayer, D.B. 2009. Protein content of diets dictates the daily energy intake of a free-ranging primate. Behavioral Ecology 20: 685-690. Franke, S., Ibarra, F., Schulz, C.M., Twele, R., Poldy, J., Barrow, R.A., Peakall, P., Schiestl, F.P., Francke, W. 2009. The discovery of 2,5-dialkylcyclohexan-1,3-diones as a new class of natural products. PNAS 106(22): 8877-8882. Hall, M.L., Peters, A. 2009. Do male paternity guards ensure female fidelity in a duetting fairy-wren? Behavioral Ecology 20:222-228. Harrison, M.T., Edwards, E.J., Farquhar, G.D., Nicotra, A.B., Evans, J.R. 2009. Nitrogen in cell walls of sclerophyllous leaves accounts for little of the variation in photosynthetic nitrogen-use efficiency. Plant, Cell and Environment 32: 259-270. Henery, M.L., Stone, C., Foley, W.J. 2009. Differential defoliation of Eucalyptus grandis arises from indiscriminant oviposition and differential larval survival. Agricultural and Forest Entomology 11: 107-114. Ho, S. 2009. An examination of phylogenetic models of substitution rate variation among lineages. Biology Letters 5: 421-424. Ho, S.Y.W., Phillips, M.J. 2009. Accountiing for Calibration Uncertainty in Phylogenetic Estimation of Evolutionary Divergence Times. Systematic Biology 58(3): 367-380. Howard, C., Gilmore, S., Robertson, J., Peakall, R. 2009. A Cannabis sativa STR Genotype Database for Australian Seizures: Forensic Applications and Limitations. Journal of Forensic Sciences 54(3): 556-563. Imansyah, M.J., Jessop, T.S., Sumner, J., Purwandana, D., Ariefiandy, A., Seno, A. 2009. Distribution, seasonal use, and predation of incubation mounds of Orange-footed Scrubfowl on Komodo Island, Indonesia. Journal of Field Ornithology 80(2): 119-126. Jamieson, I.G., Taylor, S.S., Tracy, L.N., Kokko, H., Armstrong, D.P. 2009. Why some species of birds do not avoid inbreeding: insights from New Zealand robins and saddlebacks. Behavioral Ecology 20: 575-584. Jones, C.S., Bakker, F.T., Schlichting, C.D., Nicotra, A.B. 2009. Leaf shape evolution in the South African genus Pelargonium L' Hér. (Geraniaceae). Evolution 63-2: 479-497. Joseph, L., Adcock, G.J., Linde, C., Omland, K.E., Heinsohn, R., Chesser, R.T., Roshier, D. 2009. A tangled tale of two teal: population history of the grey Anas gracilis and chestnut teal A. castanea of Australia. Journal of Avian Biology 40: 430-439. Kearns, A.M., Joseph, L., Edwards, S.V., Double, M.C. 2009. Inferring the phylogeography and evolutionary history of the splendid fairy-wren Malurus splendens from mitochondrial DNA and spectrophotometry. Journal of Avian Biology 40: 7-17. Kelly, C.D., Jennions, M.D. 2009. Sexually dimorphic immune response in the harem polygynous Wellington tree weta Hemideina crassidens . Physiological Entomology 34: 174-179. Kinnear, M., Smith, L.M.A., Maurer, G., Backwell, P.R.Y., Linde, C.C. 2009. Polymorphic microsatellite loci for paternity analysis in the fiddler crab Uca mjoebergi. Journal of Crustacean Biology 29(2): 273-274. Korsten, M., Ho, S.Y.W., Davison, J., Pahn, B., Vulla, E., Roht, M., Tumanov, I.L., Kojola, I., Andersone-Lilley, Z., Ozolins, J., Pilot, M., Mertzanis, Y., Giannakopoulos, A., Vorobiev, A.A., Markov, N.I., Saveljev, A.P., Lyapunova, E.A., Abramov, A.V., Mannil, P., Valdmann, H., Pazetnov, S.V., Pazetnov, V.S., Rokov, A.M., Saarma, U. 2009. Sudden expansion of a single brown bear maternal lineage across northern continental Eurasia after the last ice age: a general demographic model for mammals? Molecular Ecology 18: 1963-1979. Koumoundouros, T., Sumner, J., Clemann, N., Stuart-Fox, D. 2009. Current genetic isolation and fragmentation contrasts with historical connectivity in an alpine lizard (Cyclodomorphus praealtus) threatened by climate change. Biological Conservation 142: 992-1002. Lailvaux, S.P., Reaney, L.T., Backwell, P.R.Y. 2009. Dishonest signalling of fighting ability and multiple performance traits in the fiddler crab Uca mjoebergi. Functional Ecology 23: 359-366. Lambkin, C.L., Trueman, J.W.H., Yeates, D.K., Holston, K.C., Webb, D.W., Hauser, M., Metz, M.A., Hill, H.N., Skevington, J.H., Yang, L., Irwin, M.E., Wiegmann, B.M. 2009. Supertrees and the Tree of Life: generating a metaphylogeny for a diverse invertebrate family (Insecta: Diptera: Therevidae) using constraint trees and the parsimony ratchet to overcome low taxon overlap. Invertebrate Systematics 23: 171-191. Langmore, N.E., Kilner, R.M. 2009. Why do Horsfield's bronze-cuckoo Chalcites basalis eggs mimic those of their hosts? Behavioral Ecology and Sociobiology 63: 1127-1131. Langmore, N.E., Stevens, M., Maurer, G., Kilner, R.M. 2009. Are dark cuckoo egss cryptic in host nests? Animal Behaviour 78: 461-468. Linde. C.C., Zala, M., McDonald, B.A. 2009. Molecular evidence for recent founder populations and human-mediated migration in the barley scald pathogen Rhynchosporium secalis. Molecular Phylogenetics and Evolution 51: 454-464. Magrath, M.J.L., Santema, P., Bouwman, K.M., Brinkhuizen, D.M., Griffith, S.C., Langmore, N.E. 2009. Seasonal decline in reproductive performance varies with colony size in the fairy martin, Petrochelidon ariel. Behavioral Ecology and Sociobiology 63: 661-672. Magrath, R.D., Pitcher, B.J., Gardner, J.L. 2009. Recognition of other species' aerial alarm calls: speaking the same language or learning another? Proc. R. Soc. B 276: 769-774. Magrath, R.D., Pitcher, B.J., Gardner, J.L. 2009. An avian eavesdropping network: alarm signal reliability and heterospecific response. Behavioral Ecology 20: 745-752. Maurer, G., Blomberg, S. 2009. Does testis size in cuckoos vary with paternal care? The Auk 126(1): 24-30. Moritz, C., Hoskin, C.J., MacKenzie, J.B., Phillips, B.L., Tonione, M., Silva, N., VanDerWal, J., Williams, S.E., Graham, C.H. 2009. Identification and dynamics of a cryptic suture zone in tropical rainforest. Proc. R. Soc. B 276: 1235-1244. Murai, M., Backwell, P.R.Y., Jennions, M.D. 2009. The cost of reliable signaling: experimental evidence for predictable variation among males in a cost-benefit trade-off between sexually selected traits. Evolution 63(9): 2363-2371. Phillips, M.J. 2009. Branch-length estimation bias misleads molecular dating for a vertebrate mitochondrial phylogeny. Gene 441: 132-140. Phillips, M.J. 2009. Mammalian and avian survival across the Cretaceous- Tertiary boundary. New Zealand Science Review 66(1): 34-38. Phillips, R.D., Faast, R., Bower, C.C., Brown, G.R., Peakall, R. 2009. Implications of pollination by food and sexual deception for pollinator specificity, fruit set, population genetics and conservation of Caladenia (Orchidaceae). Australian Journal of Botany 57: 287-306. Pratt, R.C., Gibb, G.C., Morgan-Richards, M., Phillips, M.J., Hendy, M.D., Penny, D. 2009. Toward Resolving Deep Neoaves Phylogeny: Data, Signal Enhancement, and Priors. Molecular Biology and Evolution 26(2): 313-326. Rambaut, A., Ho, S.Y.W., Drummond, A.J., Shapiro, B. 2009. Accommodating the Effect of Ancient DNA Damage on Inferences of Demographic Histories. Molecular Biology and Evolution 26(2): 245-248. Santema, P., Griffith, S.C., Langmore, N.E., Komdeur, J., Magrath, M.J.L. 2009. Does foraging efficiency vary with colony size in the fairy martin Petrochelidon ariel? Journal of Avian Biology 40: 57-66. Shearman, P.L., Ash, J., Mackey, B., Bryan, J.E., Lokes, B. 2009. Forest Conversion and Degradation in Papua New Guinea 1972-2002. Biotropica 41(3): 379-390. Singh, I.P., Sidana, J., Bansal, P., Foley, W.J. 2009. Phloroglucinol compounds of therapeutic interest: global patent and technology status. Expert Opinion on Therapeutic Patents 19(6): 847-866. Torriani, S.F.F., Linde, C.C., McDonald, B.A. 2009. Sequence conservation in the mitochondrial cytochrome b gene and lack of G143A Qol resistance allele in a global sample of Rhynchosporium secalis. Australasian Plant Pathology 38: 202-207. Whiting, M.J., Webb, J.K., Keogh, J.S. 2009. Flat lizard female mimics use sexual deception in visual but not chemical signals. Proc. R. Soc. B 276: 1585-1591. Wilkins, C.F., Orthia, L.A., Crisp, M.D. 2009. A new species of Pultenaea (Mirbelieae: Fabaceae) from Kundip, Western Australia. Nuytsia 19(1): 191-196. Willerslev, E., Gilbert, M.T.P., Binladen, J., Ho, S.Y.W., Campos, P.F., Ratan, A., Tomsho, L.P., da Fonseca R.R., Sher, A., Kuznetsova, T.V., Nowak-Kemp, M., Roth, T.L., Miller, W., Schuster, S.C. 2009. Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution. BMC Evolutionary Biology 9: 95. Yasukawa, K., Cockburn, A. 2009. Antipredator vigilance in cooperatively breeding superb fairy-wrens (Malurus cyaneus). The Auk 126(1): 147-154. Zaffarano, P.L., McDonald, B.A., Linde, C.C. 2009. Phylogeographical analyses reveal global migration patterns of the barley scald pathogen Rhynchosporium secalis. Molecular Ecology 18: 279-293. Zajitschek, F., Hunt, J., Jennions, M.D., Hall, M.D., Brooks, R.C. 2009. Effects of juvenile and adult diet on ageing and reproductive effort of male and female black field crickets, Teleogryllus commodus . Functional Ecology 23: 602-611.
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